Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL445675.2-201ENST00000620291 557 ntBASIC18.87■□□□□ 0.61
CPNE1Q99829 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 AC126763.1-201ENST00000552015 2118 ntBASIC18.86■□□□□ 0.61
CPNE1Q99829 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE1Q99829 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE1Q99829 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CPNE1Q99829 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE1Q99829 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE1Q99829 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPNE1Q99829 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CPNE1Q99829 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.86■□□□□ 0.61
CPNE1Q99829 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CPNE1Q99829 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE1Q99829 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.86■□□□□ 0.61
CPNE1Q99829 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.86■□□□□ 0.61
CPNE1Q99829 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.86■□□□□ 0.61
CPNE1Q99829 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPNE1Q99829 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE1Q99829 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 KRT8P11-201ENST00000409686 1436 ntBASIC18.85■□□□□ 0.61
CPNE1Q99829 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE1Q99829 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.85■□□□□ 0.61
CPNE1Q99829 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.85■□□□□ 0.61
CPNE1Q99829 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE1Q99829 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CPNE1Q99829 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPNE1Q99829 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPNE1Q99829 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.85■□□□□ 0.61
CPNE1Q99829 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
CPNE1Q99829 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CPNE1Q99829 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CPNE1Q99829 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.84■□□□□ 0.61
CPNE1Q99829 PRSS44-201ENST00000515154 1146 ntBASIC18.84■□□□□ 0.61
CPNE1Q99829 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.84■□□□□ 0.61
CPNE1Q99829 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.84■□□□□ 0.61
CPNE1Q99829 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.84■□□□□ 0.61
CPNE1Q99829 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 AC131212.4-201ENST00000623606 975 ntBASIC18.84■□□□□ 0.61
CPNE1Q99829 AC068587.9-201ENST00000641814 219 ntBASIC18.84■□□□□ 0.61
CPNE1Q99829 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.84■□□□□ 0.61
CPNE1Q99829 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.84■□□□□ 0.61
CPNE1Q99829 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPNE1Q99829 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CPNE1Q99829 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CPNE1Q99829 MTMR9LP-203ENST00000426597 1545 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms