Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 NUDT16P1-203ENST00000513809 620 ntBASIC20■□□□□ 0.79
PCDHB18PQ96TA0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHB18PQ96TA0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 AL049637.2-201ENST00000641778 930 ntBASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB18PQ96TA0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 AC012618.2-201ENST00000428058 849 ntBASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB18PQ96TA0 AC007613.1-201ENST00000572811 2597 ntBASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 AL357033.4-201ENST00000617703 1807 ntBASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB18PQ96TA0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms