Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 AL645608.8-201ENST00000606034 2086 ntBASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMIM4Q8WVI0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 AC124067.4-201ENST00000519691 2379 ntBASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMIM4Q8WVI0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 KRT18P61-201ENST00000585825 1298 ntBASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMIM4Q8WVI0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 AL355472.2-201ENST00000422958 438 ntBASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.1■□□□□ 0.17
SMIM4Q8WVI0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms