Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 TSPY21P-201ENST00000433481 731 ntBASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 GCSHP5-201ENST00000443090 522 ntBASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 AC098590.1-201ENST00000468126 897 ntBASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCHCR1Q8TD31 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCHCR1Q8TD31 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.64■□□□□ 0.74
CCHCR1Q8TD31 AP000997.3-201ENST00000623333 2250 ntBASIC19.64■□□□□ 0.74
CCHCR1Q8TD31 PCDHB18P-201ENST00000524813 2368 ntBASIC19.64■□□□□ 0.74
CCHCR1Q8TD31 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCHCR1Q8TD31 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 AC090340.1-201ENST00000620778 4980 ntBASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 AL390961.4-201ENST00000623958 2535 ntBASIC19.64■□□□□ 0.73
CCHCR1Q8TD31 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCHCR1Q8TD31 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 UBE2SP1-201ENST00000450587 669 ntBASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 KRT16P5-201ENST00000455284 522 ntBASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCHCR1Q8TD31 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms