Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
ZIC4Q8N9L1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZIC4Q8N9L1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZIC4Q8N9L1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 AC008556.1-201ENST00000610908 2040 ntBASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZIC4Q8N9L1 AL031598.1-201ENST00000561511 1773 ntBASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 MCCD1P1-208ENST00000445732 328 ntBASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 AC093503.3-201ENST00000624917 2352 ntBASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.66■□□□□ 0.26
ZIC4Q8N9L1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZIC4Q8N9L1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 KRT8P45-201ENST00000414328 1447 ntBASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 AL357033.4-201ENST00000617703 1807 ntBASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 HMGA1P5-201ENST00000412453 271 ntBASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 CR769767.2-201ENST00000622735 460 ntBASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.64■□□□□ 0.25
ZIC4Q8N9L1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZIC4Q8N9L1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms