Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 AC083880.1-201ENST00000608266 535 ntBASIC20.97■□□□□ 0.95
DHX40Q8IX18 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 RCC2P6-201ENST00000526625 1557 ntBASIC20.97■□□□□ 0.95
DHX40Q8IX18 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DHX40Q8IX18 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DHX40Q8IX18 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 AC020916.1-201ENST00000587762 1774 ntBASIC20.96■□□□□ 0.95
DHX40Q8IX18 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 SOX15-203ENST00000570788 1093 ntBASIC20.96■□□□□ 0.95
DHX40Q8IX18 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 AC135776.1-201ENST00000319817 2481 ntBASIC20.96■□□□□ 0.95
DHX40Q8IX18 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DHX40Q8IX18 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
DHX40Q8IX18 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
DHX40Q8IX18 ESPNP-201ENST00000270691 2015 ntBASIC20.95■□□□□ 0.94
DHX40Q8IX18 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
DHX40Q8IX18 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
DHX40Q8IX18 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
DHX40Q8IX18 KRT8P41-201ENST00000533985 1514 ntBASIC20.95■□□□□ 0.94
DHX40Q8IX18 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
DHX40Q8IX18 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.95■□□□□ 0.94
DHX40Q8IX18 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 AC008687.6-201ENST00000596318 630 ntBASIC20.95■□□□□ 0.94
DHX40Q8IX18 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
DHX40Q8IX18 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
DHX40Q8IX18 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.94■□□□□ 0.94
DHX40Q8IX18 AC068587.9-201ENST00000641814 219 ntBASIC20.94■□□□□ 0.94
DHX40Q8IX18 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DHX40Q8IX18 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
DHX40Q8IX18 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
DHX40Q8IX18 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DHX40Q8IX18 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms