Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 FAM207BP-201ENST00000447172 505 ntBASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD1LQ86WJ1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 AC007613.1-201ENST00000572811 2597 ntBASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 AC142381.4-202ENST00000563973 229 ntBASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD1LQ86WJ1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 BICD1-207ENST00000551848 1962 ntBASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 CD177P1-201ENST00000606252 935 ntBASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 AC073592.3-201ENST00000625118 1834 ntBASIC23.29■■□□□ 1.32
CHD1LQ86WJ1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 GCSHP5-201ENST00000443090 522 ntBASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.28■■□□□ 1.32
CHD1LQ86WJ1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 AL135905.2-201ENST00000584934 1404 ntBASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.27■■□□□ 1.32
CHD1LQ86WJ1 AP000692.2-201ENST00000608391 879 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms