Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 ABALON-201ENST00000629058 1903 ntBASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCHD4Q6ZW05 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 AP006587.1-201ENST00000534129 1502 ntBASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 AL121906.2-201ENST00000621597 723 ntBASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCHD4Q6ZW05 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTCHD4Q6ZW05 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.33■□□□□ 0.36
PTCHD4Q6ZW05 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms