Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 GCK-205ENST00000437084 1385 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 COX20-201ENST00000366528 568 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 TERF1P5-201ENST00000477545 1207 ntBASIC11.96□□□□□ -0.49
LINC00575Q6W349 AC016405.3-201ENST00000607710 860 ntBASIC11.96□□□□□ -0.49
LINC00575Q6W349 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 TFG-210ENST00000620299 1289 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
LINC00575Q6W349 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00575Q6W349 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
LINC00575Q6W349 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
LINC00575Q6W349 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 FER1L4-210ENST00000615531 5998 ntBASIC11.96□□□□□ -0.5
LINC00575Q6W349 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00575Q6W349 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
LINC00575Q6W349 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC00575Q6W349 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 AC027612.3-201ENST00000413684 1047 ntBASIC11.95□□□□□ -0.5
LINC00575Q6W349 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00575Q6W349 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00575Q6W349 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 AC012317.2-201ENST00000623305 2251 ntBASIC11.94□□□□□ -0.5
LINC00575Q6W349 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00575Q6W349 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00575Q6W349 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms