Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC00242Q5T6M2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 AC004911.1-201ENST00000416316 871 ntBASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 AC008764.6-201ENST00000595909 2069 ntBASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00242Q5T6M2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00242Q5T6M2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.9□□□□□ -0.35
LINC00242Q5T6M2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00242Q5T6M2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00242Q5T6M2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00242Q5T6M2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00242Q5T6M2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms