Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDCD4Q53EL6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 AC098934.4-201ENST00000564127 592 ntBASIC18.12■□□□□ 0.49
PDCD4Q53EL6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 AL162741.1-201ENST00000565563 1558 ntBASIC18.12■□□□□ 0.49
PDCD4Q53EL6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDCD4Q53EL6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 AC126763.1-201ENST00000552015 2118 ntBASIC18.11■□□□□ 0.49
PDCD4Q53EL6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 AC018470.1-201ENST00000624790 3129 ntBASIC18.11■□□□□ 0.49
PDCD4Q53EL6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 PRKY-204ENST00000533551 1019 ntBASIC18.11■□□□□ 0.49
PDCD4Q53EL6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.11■□□□□ 0.49
PDCD4Q53EL6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 HEIH-201ENST00000623091 1652 ntBASIC18.11■□□□□ 0.49
PDCD4Q53EL6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDCD4Q53EL6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.1■□□□□ 0.49
PDCD4Q53EL6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 UNC93B4-201ENST00000505679 747 ntBASIC18.1■□□□□ 0.49
PDCD4Q53EL6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDCD4Q53EL6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms