Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SYPL1Q16563 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.56■□□□□ 0.4
SYPL1Q16563 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.56■□□□□ 0.4
SYPL1Q16563 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SYPL1Q16563 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.56■□□□□ 0.4
SYPL1Q16563 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.56■□□□□ 0.4
SYPL1Q16563 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.56■□□□□ 0.4
SYPL1Q16563 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.56■□□□□ 0.4
SYPL1Q16563 CR392000.1-201ENST00000624770 1228 ntBASIC17.56■□□□□ 0.4
SYPL1Q16563 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SYPL1Q16563 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.56■□□□□ 0.4
SYPL1Q16563 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.56■□□□□ 0.4
SYPL1Q16563 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SYPL1Q16563 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYPL1Q16563 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SYPL1Q16563 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.55■□□□□ 0.4
SYPL1Q16563 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.55■□□□□ 0.4
SYPL1Q16563 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.55■□□□□ 0.4
SYPL1Q16563 HEIH-201ENST00000623091 1652 ntBASIC17.55■□□□□ 0.4
SYPL1Q16563 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
SYPL1Q16563 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.55■□□□□ 0.4
SYPL1Q16563 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.55■□□□□ 0.4
SYPL1Q16563 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.55■□□□□ 0.4
SYPL1Q16563 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SYPL1Q16563 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SYPL1Q16563 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SYPL1Q16563 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
SYPL1Q16563 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYPL1Q16563 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SYPL1Q16563 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SYPL1Q16563 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SYPL1Q16563 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 AC004951.3-201ENST00000418645 1148 ntBASIC17.54■□□□□ 0.4
SYPL1Q16563 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 PRSS44-201ENST00000515154 1146 ntBASIC17.54■□□□□ 0.4
SYPL1Q16563 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.54■□□□□ 0.4
SYPL1Q16563 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYPL1Q16563 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYPL1Q16563 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SYPL1Q16563 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYPL1Q16563 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.53■□□□□ 0.4
SYPL1Q16563 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYPL1Q16563 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SYPL1Q16563 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYPL1Q16563 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SYPL1Q16563 AL353807.1-201ENST00000427475 662 ntBASIC17.53■□□□□ 0.4
SYPL1Q16563 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYPL1Q16563 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.53■□□□□ 0.4
SYPL1Q16563 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.53■□□□□ 0.4
SYPL1Q16563 AF186192.3-201ENST00000583427 947 ntBASIC17.53■□□□□ 0.4
SYPL1Q16563 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYPL1Q16563 AL359736.2-201ENST00000621992 437 ntBASIC17.53■□□□□ 0.4
SYPL1Q16563 FAM197Y4-202ENST00000622692 608 ntBASIC17.53■□□□□ 0.4
SYPL1Q16563 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.53■□□□□ 0.4
SYPL1Q16563 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SYPL1Q16563 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYPL1Q16563 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.53■□□□□ 0.4
SYPL1Q16563 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms