Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX6-1P78426 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX6-1P78426 AL121894.2-201ENST00000602977 491 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 AC139887.4-201ENST00000607877 719 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 AC011298.2-201ENST00000617989 482 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 ZNF815P-204ENST00000434898 1737 ntBASIC16.61■□□□□ 0.25
NKX6-1P78426 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-1P78426 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX6-1P78426 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX6-1P78426 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
NKX6-1P78426 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NKX6-1P78426 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX6-1P78426 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX6-1P78426 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 AC104417.2-201ENST00000562989 1793 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 AL031133.1-201ENST00000406807 723 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.6■□□□□ 0.25
NKX6-1P78426 AC091390.4-202ENST00000476426 537 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.6■□□□□ 0.25
NKX6-1P78426 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.6■□□□□ 0.25
NKX6-1P78426 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NKX6-1P78426 AP000692.2-201ENST00000608391 879 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX6-1P78426 AP000550.4-202ENST00000639755 178 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 AC116562.4-202ENST00000641738 218 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NKX6-1P78426 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-1P78426 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NKX6-1P78426 KRT8P41-201ENST00000533985 1514 ntBASIC16.6■□□□□ 0.25
NKX6-1P78426 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX6-1P78426 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-1P78426 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NKX6-1P78426 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NKX6-1P78426 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.59■□□□□ 0.25
NKX6-1P78426 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-1P78426 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-1P78426 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.59■□□□□ 0.25
NKX6-1P78426 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-1P78426 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-1P78426 KRT18P48-201ENST00000434763 852 ntBASIC16.59■□□□□ 0.25
NKX6-1P78426 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-1P78426 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 PCDHAC2-203ENST00000615316 3011 ntBASIC16.59■□□□□ 0.25
NKX6-1P78426 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-1P78426 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-1P78426 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
NKX6-1P78426 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NKX6-1P78426 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-1P78426 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-1P78426 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
NKX6-1P78426 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.58■□□□□ 0.25
NKX6-1P78426 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.58■□□□□ 0.25
NKX6-1P78426 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NKX6-1P78426 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NKX6-1P78426 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
NKX6-1P78426 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
NKX6-1P78426 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 TSPY5P-201ENST00000426936 936 ntBASIC16.58■□□□□ 0.24
NKX6-1P78426 CCR12P-201ENST00000446203 998 ntBASIC16.58■□□□□ 0.24
NKX6-1P78426 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.58■□□□□ 0.24
NKX6-1P78426 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.58■□□□□ 0.24
NKX6-1P78426 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 MYC-208ENST00000641036 567 ntBASIC16.58■□□□□ 0.24
NKX6-1P78426 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.58■□□□□ 0.24
NKX6-1P78426 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms