Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TUBA4AP68366 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBA4AP68366 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBA4AP68366 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.69■□□□□ 0.42
TUBA4AP68366 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBA4AP68366 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TUBA4AP68366 GNAS-203ENST00000306120 1878 ntBASIC17.69■□□□□ 0.42
TUBA4AP68366 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TUBA4AP68366 HCG11-201ENST00000411553 5696 ntBASIC17.69■□□□□ 0.42
TUBA4AP68366 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TUBA4AP68366 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TUBA4AP68366 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TUBA4AP68366 TNRC18P3-201ENST00000441896 2691 ntBASIC17.68■□□□□ 0.42
TUBA4AP68366 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBA4AP68366 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
TUBA4AP68366 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.68■□□□□ 0.42
TUBA4AP68366 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBA4AP68366 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TUBA4AP68366 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.68■□□□□ 0.42
TUBA4AP68366 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBA4AP68366 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBA4AP68366 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.67■□□□□ 0.42
TUBA4AP68366 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.67■□□□□ 0.42
TUBA4AP68366 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 CD99P1-205ENST00000527459 561 ntBASIC17.67■□□□□ 0.42
TUBA4AP68366 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.67■□□□□ 0.42
TUBA4AP68366 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TUBA4AP68366 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TUBA4AP68366 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TUBA4AP68366 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TUBA4AP68366 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TUBA4AP68366 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 AC106820.2-201ENST00000563775 3264 ntBASIC17.66■□□□□ 0.42
TUBA4AP68366 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 KRT8P17-201ENST00000453110 1448 ntBASIC17.66■□□□□ 0.42
TUBA4AP68366 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TUBA4AP68366 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.66■□□□□ 0.42
TUBA4AP68366 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.66■□□□□ 0.42
TUBA4AP68366 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.66■□□□□ 0.42
TUBA4AP68366 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.66■□□□□ 0.42
TUBA4AP68366 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.66■□□□□ 0.42
TUBA4AP68366 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.66■□□□□ 0.42
TUBA4AP68366 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TUBA4AP68366 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms