Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNRPFP62306 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SNRPFP62306 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SNRPFP62306 MIR3180-5-201ENST00000583743 153 ntBASIC20.49■□□□□ 0.87
SNRPFP62306 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.49■□□□□ 0.87
SNRPFP62306 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRPFP62306 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRPFP62306 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNRPFP62306 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 AC008556.1-201ENST00000610908 2040 ntBASIC20.48■□□□□ 0.87
SNRPFP62306 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNRPFP62306 MIR4674-201ENST00000582457 87 ntBASIC20.48■□□□□ 0.87
SNRPFP62306 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNRPFP62306 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRPFP62306 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 AC112777.1-201ENST00000540175 1423 ntBASIC20.47■□□□□ 0.87
SNRPFP62306 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRPFP62306 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.47■□□□□ 0.87
SNRPFP62306 AL512604.3-201ENST00000569583 964 ntBASIC20.47■□□□□ 0.87
SNRPFP62306 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SNRPFP62306 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.47■□□□□ 0.87
SNRPFP62306 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SNRPFP62306 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SNRPFP62306 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.47■□□□□ 0.87
SNRPFP62306 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNRPFP62306 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPFP62306 KRT8P45-201ENST00000414328 1447 ntBASIC20.46■□□□□ 0.87
SNRPFP62306 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SNRPFP62306 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.46■□□□□ 0.87
SNRPFP62306 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPFP62306 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPFP62306 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPFP62306 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.46■□□□□ 0.87
SNRPFP62306 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SNRPFP62306 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.46■□□□□ 0.87
SNRPFP62306 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
SNRPFP62306 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNRPFP62306 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.46■□□□□ 0.87
SNRPFP62306 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.87
SNRPFP62306 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 KRT8P7-201ENST00000533003 1432 ntBASIC20.45■□□□□ 0.86
SNRPFP62306 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SNRPFP62306 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SNRPFP62306 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SNRPFP62306 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.45■□□□□ 0.86
SNRPFP62306 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 AC087499.1-201ENST00000418141 1075 ntBASIC20.45■□□□□ 0.86
SNRPFP62306 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.45■□□□□ 0.86
SNRPFP62306 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.45■□□□□ 0.86
SNRPFP62306 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
SNRPFP62306 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.45■□□□□ 0.86
SNRPFP62306 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SNRPFP62306 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.45■□□□□ 0.86
SNRPFP62306 KRT18P22-201ENST00000402024 1347 ntBASIC20.45■□□□□ 0.86
SNRPFP62306 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.45■□□□□ 0.86
SNRPFP62306 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 AC034236.2-201ENST00000606662 1610 ntBASIC20.45■□□□□ 0.86
SNRPFP62306 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNRPFP62306 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms