Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 CROCCP3-202ENST00000420820 1947 ntBASIC17.66■□□□□ 0.42
RPS3AP61247 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPS3AP61247 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
RPS3AP61247 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS3AP61247 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS3AP61247 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS3AP61247 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.65■□□□□ 0.42
RPS3AP61247 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 AC012618.2-201ENST00000428058 849 ntBASIC17.65■□□□□ 0.42
RPS3AP61247 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.65■□□□□ 0.42
RPS3AP61247 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS3AP61247 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RPS3AP61247 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS3AP61247 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RPS3AP61247 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS3AP61247 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RPS3AP61247 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS3AP61247 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPS3AP61247 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RPS3AP61247 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.64■□□□□ 0.42
RPS3AP61247 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPS3AP61247 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RPS3AP61247 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPS3AP61247 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS3AP61247 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.64■□□□□ 0.41
RPS3AP61247 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPS3AP61247 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RPS3AP61247 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RPS3AP61247 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPS3AP61247 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.64■□□□□ 0.41
RPS3AP61247 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.64■□□□□ 0.41
RPS3AP61247 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS3AP61247 HCG11-201ENST00000411553 5696 ntBASIC17.64■□□□□ 0.41
RPS3AP61247 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 HTR7P1-201ENST00000538670 1336 ntBASIC17.64■□□□□ 0.41
RPS3AP61247 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RPS3AP61247 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.64■□□□□ 0.41
RPS3AP61247 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPS3AP61247 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.63■□□□□ 0.41
RPS3AP61247 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.63■□□□□ 0.41
RPS3AP61247 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RPS3AP61247 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RPS3AP61247 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RPS3AP61247 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.63■□□□□ 0.41
RPS3AP61247 TUBB8P6-201ENST00000436895 1288 ntBASIC17.63■□□□□ 0.41
RPS3AP61247 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPS3AP61247 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms