Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.97■□□□□ 0.47
SH3BGRP55822 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.97■□□□□ 0.47
SH3BGRP55822 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.97■□□□□ 0.47
SH3BGRP55822 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.97■□□□□ 0.47
SH3BGRP55822 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SH3BGRP55822 AL589743.5-201ENST00000616611 1050 ntBASIC17.97■□□□□ 0.47
SH3BGRP55822 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.97■□□□□ 0.47
SH3BGRP55822 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.97■□□□□ 0.47
SH3BGRP55822 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.97■□□□□ 0.47
SH3BGRP55822 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SH3BGRP55822 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SH3BGRP55822 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.97■□□□□ 0.47
SH3BGRP55822 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SH3BGRP55822 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3BGRP55822 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SH3BGRP55822 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 KRT18P68-201ENST00000392293 1000 ntBASIC17.96■□□□□ 0.47
SH3BGRP55822 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.96■□□□□ 0.47
SH3BGRP55822 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SH3BGRP55822 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3BGRP55822 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.96■□□□□ 0.47
SH3BGRP55822 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 AL031598.1-201ENST00000561511 1773 ntBASIC17.96■□□□□ 0.47
SH3BGRP55822 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.96■□□□□ 0.47
SH3BGRP55822 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
SH3BGRP55822 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SH3BGRP55822 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SH3BGRP55822 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SH3BGRP55822 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.96■□□□□ 0.46
SH3BGRP55822 AC093525.10-201ENST00000625130 1569 ntBASIC17.96■□□□□ 0.46
SH3BGRP55822 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SH3BGRP55822 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SH3BGRP55822 AC006333.2-201ENST00000607957 2099 ntBASIC17.95■□□□□ 0.46
SH3BGRP55822 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SH3BGRP55822 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SH3BGRP55822 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SH3BGRP55822 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.95■□□□□ 0.46
SH3BGRP55822 AC104771.1-201ENST00000603335 964 ntBASIC17.95■□□□□ 0.46
SH3BGRP55822 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.95■□□□□ 0.46
SH3BGRP55822 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.95■□□□□ 0.46
SH3BGRP55822 AL391005.1-201ENST00000623953 2435 ntBASIC17.95■□□□□ 0.46
SH3BGRP55822 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
SH3BGRP55822 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.95■□□□□ 0.46
SH3BGRP55822 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SH3BGRP55822 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SH3BGRP55822 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SH3BGRP55822 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms