Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CDH6P55285 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 MIR718-201ENST00000390190 70 ntBASIC19.62■□□□□ 0.73
CDH6P55285 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDH6P55285 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH6P55285 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.62■□□□□ 0.73
CDH6P55285 CKBP1-201ENST00000565489 1086 ntBASIC19.62■□□□□ 0.73
CDH6P55285 AC113410.3-201ENST00000623366 203 ntBASIC19.62■□□□□ 0.73
CDH6P55285 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CDH6P55285 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDH6P55285 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH6P55285 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH6P55285 AC138932.1-201ENST00000534164 6830 ntBASIC19.62■□□□□ 0.73
CDH6P55285 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH6P55285 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH6P55285 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH6P55285 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDH6P55285 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH6P55285 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH6P55285 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH6P55285 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDH6P55285 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 AC008550.1-201ENST00000511500 884 ntBASIC19.61■□□□□ 0.73
CDH6P55285 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH6P55285 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH6P55285 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.61■□□□□ 0.73
CDH6P55285 AL049637.2-201ENST00000641778 930 ntBASIC19.61■□□□□ 0.73
CDH6P55285 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDH6P55285 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH6P55285 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
CDH6P55285 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH6P55285 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH6P55285 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH6P55285 ANO7L1-203ENST00000602586 1720 ntBASIC19.6■□□□□ 0.73
CDH6P55285 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDH6P55285 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CDH6P55285 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH6P55285 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH6P55285 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH6P55285 NUDT16P1-203ENST00000513809 620 ntBASIC19.6■□□□□ 0.73
CDH6P55285 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.6■□□□□ 0.73
CDH6P55285 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.6■□□□□ 0.73
CDH6P55285 AP000692.2-201ENST00000608391 879 ntBASIC19.6■□□□□ 0.73
CDH6P55285 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CDH6P55285 WIZP1-201ENST00000531444 2299 ntBASIC19.6■□□□□ 0.73
CDH6P55285 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH6P55285 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH6P55285 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDH6P55285 KRT8P3-201ENST00000519669 1449 ntBASIC19.59■□□□□ 0.73
CDH6P55285 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH6P55285 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH6P55285 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.59■□□□□ 0.73
CDH6P55285 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH6P55285 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH6P55285 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH6P55285 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDH6P55285 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH6P55285 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.59■□□□□ 0.73
CDH6P55285 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH6P55285 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH6P55285 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH6P55285 Z99916.2-201ENST00000604037 246 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms