Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 MIR3652-201ENST00000579335 131 ntBASIC21.17■□□□□ 0.98
EPHB4P54760 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 GPALPP1-207ENST00000611650 899 ntBASIC21.17■□□□□ 0.98
EPHB4P54760 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHB4P54760 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHB4P54760 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.17■□□□□ 0.98
EPHB4P54760 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHB4P54760 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.17■□□□□ 0.98
EPHB4P54760 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EPHB4P54760 AC004408.2-201ENST00000623613 2777 ntBASIC21.16■□□□□ 0.98
EPHB4P54760 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.16■□□□□ 0.98
EPHB4P54760 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 KRT8P10-201ENST00000450021 1447 ntBASIC21.16■□□□□ 0.98
EPHB4P54760 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.16■□□□□ 0.98
EPHB4P54760 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
EPHB4P54760 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.16■□□□□ 0.98
EPHB4P54760 PRELID1P1-202ENST00000567272 903 ntBASIC21.16■□□□□ 0.98
EPHB4P54760 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EPHB4P54760 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.15■□□□□ 0.98
EPHB4P54760 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
EPHB4P54760 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
EPHB4P54760 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 PHGDH-210ENST00000641115 1638 ntBASIC21.15■□□□□ 0.98
EPHB4P54760 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.15■□□□□ 0.98
EPHB4P54760 KRT17P6-201ENST00000453795 1220 ntBASIC21.15■□□□□ 0.98
EPHB4P54760 AC006538.3-201ENST00000612495 578 ntBASIC21.15■□□□□ 0.98
EPHB4P54760 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
EPHB4P54760 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
EPHB4P54760 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EPHB4P54760 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHB4P54760 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHB4P54760 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
EPHB4P54760 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.14■□□□□ 0.98
EPHB4P54760 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHB4P54760 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EPHB4P54760 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.14■□□□□ 0.97
EPHB4P54760 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.14■□□□□ 0.97
EPHB4P54760 AC023511.2-201ENST00000618803 211 ntBASIC21.14■□□□□ 0.97
EPHB4P54760 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
EPHB4P54760 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.14■□□□□ 0.97
EPHB4P54760 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
EPHB4P54760 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
EPHB4P54760 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EPHB4P54760 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.13■□□□□ 0.97
EPHB4P54760 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.13■□□□□ 0.97
EPHB4P54760 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
EPHB4P54760 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.13■□□□□ 0.97
EPHB4P54760 CKBP1-201ENST00000565489 1086 ntBASIC21.13■□□□□ 0.97
EPHB4P54760 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.13■□□□□ 0.97
EPHB4P54760 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 AC004263.2-201ENST00000617183 678 ntBASIC21.13■□□□□ 0.97
EPHB4P54760 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.13■□□□□ 0.97
EPHB4P54760 TMEM179-206ENST00000616017 1645 ntBASIC21.13■□□□□ 0.97
EPHB4P54760 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EPHB4P54760 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms