Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.37■□□□□ 0.69
ITGA8P53708 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.37■□□□□ 0.69
ITGA8P53708 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA8P53708 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA8P53708 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ITGA8P53708 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITGA8P53708 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
ITGA8P53708 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ITGA8P53708 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ITGA8P53708 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ITGA8P53708 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
ITGA8P53708 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ITGA8P53708 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ITGA8P53708 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA8P53708 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ITGA8P53708 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA8P53708 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ITGA8P53708 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 C1QL1P1-201ENST00000568105 661 ntBASIC19.35■□□□□ 0.69
ITGA8P53708 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.35■□□□□ 0.69
ITGA8P53708 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.35■□□□□ 0.69
ITGA8P53708 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA8P53708 HEIH-201ENST00000623091 1652 ntBASIC19.35■□□□□ 0.69
ITGA8P53708 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA8P53708 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ITGA8P53708 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.35■□□□□ 0.69
ITGA8P53708 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ITGA8P53708 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ITGA8P53708 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ITGA8P53708 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
ITGA8P53708 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA8P53708 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA8P53708 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.34■□□□□ 0.69
ITGA8P53708 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.34■□□□□ 0.69
ITGA8P53708 UNC93B4-201ENST00000505679 747 ntBASIC19.34■□□□□ 0.69
ITGA8P53708 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA8P53708 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.34■□□□□ 0.69
ITGA8P53708 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.34■□□□□ 0.69
ITGA8P53708 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.34■□□□□ 0.69
ITGA8P53708 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA8P53708 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 AL499627.1-201ENST00000569373 2188 ntBASIC19.34■□□□□ 0.69
ITGA8P53708 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
ITGA8P53708 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
ITGA8P53708 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ITGA8P53708 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ITGA8P53708 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ITGA8P53708 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.33■□□□□ 0.69
ITGA8P53708 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms