Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.52■□□□□ 0.56
GTF2A1P52655 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.52■□□□□ 0.56
GTF2A1P52655 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.52■□□□□ 0.56
GTF2A1P52655 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
GTF2A1P52655 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
GTF2A1P52655 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GTF2A1P52655 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GTF2A1P52655 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
GTF2A1P52655 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GTF2A1P52655 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.52■□□□□ 0.55
GTF2A1P52655 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GTF2A1P52655 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
GTF2A1P52655 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
GTF2A1P52655 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
GTF2A1P52655 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GTF2A1P52655 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
GTF2A1P52655 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.51■□□□□ 0.55
GTF2A1P52655 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
GTF2A1P52655 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.51■□□□□ 0.55
GTF2A1P52655 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.51■□□□□ 0.55
GTF2A1P52655 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2A1P52655 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2A1P52655 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2A1P52655 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GTF2A1P52655 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
GTF2A1P52655 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
GTF2A1P52655 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GTF2A1P52655 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2A1P52655 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.5■□□□□ 0.55
GTF2A1P52655 SRD5A1P1-201ENST00000442297 786 ntBASIC18.5■□□□□ 0.55
GTF2A1P52655 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.5■□□□□ 0.55
GTF2A1P52655 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.5■□□□□ 0.55
GTF2A1P52655 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2A1P52655 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 PCDHB17P-201ENST00000539533 2393 ntBASIC18.49■□□□□ 0.55
GTF2A1P52655 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 TCAF2P1-201ENST00000291129 2421 ntBASIC18.49■□□□□ 0.55
GTF2A1P52655 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.49■□□□□ 0.55
GTF2A1P52655 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 MIR3621-201ENST00000580529 85 ntBASIC18.49■□□□□ 0.55
GTF2A1P52655 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
GTF2A1P52655 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.49■□□□□ 0.55
GTF2A1P52655 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.49■□□□□ 0.55
GTF2A1P52655 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.49■□□□□ 0.55
GTF2A1P52655 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GTF2A1P52655 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2A1P52655 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GTF2A1P52655 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GTF2A1P52655 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2A1P52655 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.48■□□□□ 0.55
GTF2A1P52655 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2A1P52655 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2A1P52655 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2A1P52655 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2A1P52655 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GTF2A1P52655 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.48■□□□□ 0.55
GTF2A1P52655 LINC02199-201ENST00000506655 2702 ntBASIC18.48■□□□□ 0.55
GTF2A1P52655 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms