Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CDR1P51861 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.61■□□□□ 0.89
CDR1P51861 AC009237.14-201ENST00000609975 1594 ntBASIC20.61■□□□□ 0.89
CDR1P51861 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.61■□□□□ 0.89
CDR1P51861 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.61■□□□□ 0.89
CDR1P51861 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.61■□□□□ 0.89
CDR1P51861 AC005332.7-201ENST00000614046 2005 ntBASIC20.61■□□□□ 0.89
CDR1P51861 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDR1P51861 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDR1P51861 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
CDR1P51861 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDR1P51861 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.6■□□□□ 0.89
CDR1P51861 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.6■□□□□ 0.89
CDR1P51861 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDR1P51861 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.6■□□□□ 0.89
CDR1P51861 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.6■□□□□ 0.89
CDR1P51861 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDR1P51861 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.6■□□□□ 0.89
CDR1P51861 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
CDR1P51861 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDR1P51861 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDR1P51861 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.59■□□□□ 0.89
CDR1P51861 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 RCC2P6-201ENST00000526625 1557 ntBASIC20.59■□□□□ 0.89
CDR1P51861 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDR1P51861 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
CDR1P51861 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDR1P51861 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDR1P51861 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDR1P51861 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 INGX-201ENST00000359239 846 ntBASIC20.59■□□□□ 0.89
CDR1P51861 CRYGFP-201ENST00000418459 633 ntBASIC20.59■□□□□ 0.89
CDR1P51861 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.59■□□□□ 0.89
CDR1P51861 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.59■□□□□ 0.89
CDR1P51861 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CDR1P51861 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 AC131212.4-201ENST00000623606 975 ntBASIC20.59■□□□□ 0.89
CDR1P51861 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDR1P51861 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.59■□□□□ 0.89
CDR1P51861 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CDR1P51861 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDR1P51861 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDR1P51861 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDR1P51861 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.58■□□□□ 0.89
CDR1P51861 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CDR1P51861 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.58■□□□□ 0.89
CDR1P51861 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDR1P51861 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.58■□□□□ 0.89
CDR1P51861 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.58■□□□□ 0.89
CDR1P51861 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDR1P51861 SLC25A1P4-201ENST00000567977 778 ntBASIC20.58■□□□□ 0.89
CDR1P51861 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.58■□□□□ 0.89
CDR1P51861 AC011298.2-201ENST00000617989 482 ntBASIC20.58■□□□□ 0.89
CDR1P51861 AC010947.1-201ENST00000623454 693 ntBASIC20.58■□□□□ 0.89
CDR1P51861 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDR1P51861 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDR1P51861 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDR1P51861 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.58■□□□□ 0.88
CDR1P51861 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDR1P51861 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDR1P51861 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.58■□□□□ 0.88
CDR1P51861 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CDR1P51861 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.58■□□□□ 0.88
CDR1P51861 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
CDR1P51861 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDR1P51861 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDR1P51861 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms