Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HADHAP40939 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HADHAP40939 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.08■□□□□ 0.65
HADHAP40939 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HADHAP40939 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HADHAP40939 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.08■□□□□ 0.64
HADHAP40939 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.08■□□□□ 0.64
HADHAP40939 PRSS44-201ENST00000515154 1146 ntBASIC19.08■□□□□ 0.64
HADHAP40939 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.08■□□□□ 0.64
HADHAP40939 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.08■□□□□ 0.64
HADHAP40939 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HADHAP40939 MIR6786-201ENST00000616843 113 ntBASIC19.08■□□□□ 0.64
HADHAP40939 AC011298.2-201ENST00000617989 482 ntBASIC19.08■□□□□ 0.64
HADHAP40939 AC113410.3-201ENST00000623366 203 ntBASIC19.08■□□□□ 0.64
HADHAP40939 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HADHAP40939 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.08■□□□□ 0.64
HADHAP40939 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
HADHAP40939 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.08■□□□□ 0.64
HADHAP40939 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HADHAP40939 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
HADHAP40939 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.07■□□□□ 0.64
HADHAP40939 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.07■□□□□ 0.64
HADHAP40939 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.07■□□□□ 0.64
HADHAP40939 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.07■□□□□ 0.64
HADHAP40939 AC091390.4-202ENST00000476426 537 ntBASIC19.07■□□□□ 0.64
HADHAP40939 NUDT16P1-203ENST00000513809 620 ntBASIC19.07■□□□□ 0.64
HADHAP40939 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.07■□□□□ 0.64
HADHAP40939 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.07■□□□□ 0.64
HADHAP40939 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
HADHAP40939 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.07■□□□□ 0.64
HADHAP40939 Z99916.2-201ENST00000604037 246 ntBASIC19.07■□□□□ 0.64
HADHAP40939 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.07■□□□□ 0.64
HADHAP40939 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
HADHAP40939 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HADHAP40939 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HADHAP40939 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HADHAP40939 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HADHAP40939 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.06■□□□□ 0.64
HADHAP40939 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HADHAP40939 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 B3GAT3P1-201ENST00000471720 806 ntBASIC19.06■□□□□ 0.64
HADHAP40939 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.06■□□□□ 0.64
HADHAP40939 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.06■□□□□ 0.64
HADHAP40939 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.06■□□□□ 0.64
HADHAP40939 AC130371.2-201ENST00000619443 611 ntBASIC19.06■□□□□ 0.64
HADHAP40939 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HADHAP40939 AC090340.1-201ENST00000620778 4980 ntBASIC19.06■□□□□ 0.64
HADHAP40939 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HADHAP40939 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.06■□□□□ 0.64
HADHAP40939 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HADHAP40939 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HADHAP40939 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
HADHAP40939 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HADHAP40939 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HADHAP40939 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms