Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RFC5P40937 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFC5P40937 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RFC5P40937 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RFC5P40937 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC5P40937 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.79■□□□□ 0.92
RFC5P40937 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC5P40937 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RFC5P40937 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.79■□□□□ 0.92
RFC5P40937 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.79■□□□□ 0.92
RFC5P40937 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.79■□□□□ 0.92
RFC5P40937 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.79■□□□□ 0.92
RFC5P40937 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.79■□□□□ 0.92
RFC5P40937 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC5P40937 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RFC5P40937 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RFC5P40937 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RFC5P40937 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.79■□□□□ 0.92
RFC5P40937 AL161938.1-201ENST00000569833 2180 ntBASIC20.79■□□□□ 0.92
RFC5P40937 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFC5P40937 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC5P40937 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.78■□□□□ 0.92
RFC5P40937 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFC5P40937 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RFC5P40937 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC5P40937 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC5P40937 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC5P40937 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC5P40937 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC5P40937 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RFC5P40937 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.78■□□□□ 0.92
RFC5P40937 AC068587.9-201ENST00000641814 219 ntBASIC20.78■□□□□ 0.92
RFC5P40937 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.78■□□□□ 0.92
RFC5P40937 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 AC008556.1-201ENST00000610908 2040 ntBASIC20.78■□□□□ 0.92
RFC5P40937 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFC5P40937 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.77■□□□□ 0.92
RFC5P40937 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC5P40937 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.77■□□□□ 0.92
RFC5P40937 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.77■□□□□ 0.92
RFC5P40937 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RFC5P40937 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC5P40937 ARMC10P1-201ENST00000313754 855 ntBASIC20.77■□□□□ 0.92
RFC5P40937 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RFC5P40937 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC5P40937 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.77■□□□□ 0.92
RFC5P40937 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.77■□□□□ 0.92
RFC5P40937 GCSHP2-201ENST00000560971 527 ntBASIC20.77■□□□□ 0.92
RFC5P40937 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC5P40937 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RFC5P40937 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC5P40937 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.77■□□□□ 0.91
RFC5P40937 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RFC5P40937 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC5P40937 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC5P40937 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC5P40937 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC5P40937 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.76■□□□□ 0.91
RFC5P40937 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.76■□□□□ 0.91
RFC5P40937 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC5P40937 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFC5P40937 MIR564-202ENST00000385049 94 ntBASIC20.76■□□□□ 0.91
RFC5P40937 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC5P40937 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms