Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.52■□□□□ 0.56
VARSP26640 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VARSP26640 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VARSP26640 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.52■□□□□ 0.56
VARSP26640 AC087499.1-201ENST00000418141 1075 ntBASIC18.52■□□□□ 0.56
VARSP26640 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.52■□□□□ 0.56
VARSP26640 AP002982.1-201ENST00000492365 877 ntBASIC18.52■□□□□ 0.56
VARSP26640 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.52■□□□□ 0.56
VARSP26640 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.52■□□□□ 0.56
VARSP26640 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.52■□□□□ 0.56
VARSP26640 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.52■□□□□ 0.56
VARSP26640 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VARSP26640 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VARSP26640 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.52■□□□□ 0.55
VARSP26640 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
VARSP26640 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VARSP26640 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
VARSP26640 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
VARSP26640 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VARSP26640 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.52■□□□□ 0.55
VARSP26640 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
VARSP26640 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.51■□□□□ 0.55
VARSP26640 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VARSP26640 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.51■□□□□ 0.55
VARSP26640 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
VARSP26640 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 NIFKP9-201ENST00000419265 221 ntBASIC18.51■□□□□ 0.55
VARSP26640 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.51■□□□□ 0.55
VARSP26640 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.51■□□□□ 0.55
VARSP26640 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.51■□□□□ 0.55
VARSP26640 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
VARSP26640 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
VARSP26640 AC006333.2-201ENST00000607957 2099 ntBASIC18.51■□□□□ 0.55
VARSP26640 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.51■□□□□ 0.55
VARSP26640 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.51■□□□□ 0.55
VARSP26640 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VARSP26640 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.5■□□□□ 0.55
VARSP26640 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.5■□□□□ 0.55
VARSP26640 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.5■□□□□ 0.55
VARSP26640 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.5■□□□□ 0.55
VARSP26640 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 AL445675.2-201ENST00000620291 557 ntBASIC18.5■□□□□ 0.55
VARSP26640 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.5■□□□□ 0.55
VARSP26640 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
VARSP26640 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VARSP26640 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VARSP26640 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.5■□□□□ 0.55
VARSP26640 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.5■□□□□ 0.55
VARSP26640 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VARSP26640 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 AL353807.1-201ENST00000427475 662 ntBASIC18.49■□□□□ 0.55
VARSP26640 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.49■□□□□ 0.55
VARSP26640 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.49■□□□□ 0.55
VARSP26640 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
VARSP26640 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms