Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN3P20807 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CAPN3P20807 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.16■□□□□ 0.5
CAPN3P20807 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.16■□□□□ 0.5
CAPN3P20807 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 AC126763.1-201ENST00000552015 2118 ntBASIC18.16■□□□□ 0.5
CAPN3P20807 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN3P20807 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN3P20807 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CAPN3P20807 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.15■□□□□ 0.5
CAPN3P20807 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 RPPH1-201ENST00000516869 333 ntBASIC18.15■□□□□ 0.5
CAPN3P20807 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.15■□□□□ 0.5
CAPN3P20807 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 AC092368.3-202ENST00000574180 1591 ntBASIC18.15■□□□□ 0.5
CAPN3P20807 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN3P20807 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN3P20807 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.15■□□□□ 0.5
CAPN3P20807 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN3P20807 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN3P20807 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN3P20807 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.14■□□□□ 0.5
CAPN3P20807 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 ABALON-201ENST00000629058 1903 ntBASIC18.14■□□□□ 0.49
CAPN3P20807 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CAPN3P20807 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 KRT17P3-201ENST00000420566 1262 ntBASIC18.14■□□□□ 0.49
CAPN3P20807 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.14■□□□□ 0.49
CAPN3P20807 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CAPN3P20807 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN3P20807 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN3P20807 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.14■□□□□ 0.49
CAPN3P20807 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN3P20807 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN3P20807 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN3P20807 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CAPN3P20807 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN3P20807 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN3P20807 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN3P20807 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN3P20807 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN3P20807 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 AC073592.3-201ENST00000625118 1834 ntBASIC18.13■□□□□ 0.49
CAPN3P20807 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms