Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.18■□□□□ 0.98
GGPS1O95749 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GGPS1O95749 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.17■□□□□ 0.98
GGPS1O95749 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.17■□□□□ 0.98
GGPS1O95749 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
GGPS1O95749 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.17■□□□□ 0.98
GGPS1O95749 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.17■□□□□ 0.98
GGPS1O95749 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.17■□□□□ 0.98
GGPS1O95749 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.17■□□□□ 0.98
GGPS1O95749 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.17■□□□□ 0.98
GGPS1O95749 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.17■□□□□ 0.98
GGPS1O95749 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.17■□□□□ 0.98
GGPS1O95749 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GGPS1O95749 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.16■□□□□ 0.98
GGPS1O95749 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
GGPS1O95749 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 RASA4DP-201ENST00000460726 1199 ntBASIC21.16■□□□□ 0.98
GGPS1O95749 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.16■□□□□ 0.98
GGPS1O95749 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.16■□□□□ 0.98
GGPS1O95749 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.16■□□□□ 0.98
GGPS1O95749 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.16■□□□□ 0.98
GGPS1O95749 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.16■□□□□ 0.98
GGPS1O95749 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
GGPS1O95749 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GGPS1O95749 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
GGPS1O95749 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.15■□□□□ 0.98
GGPS1O95749 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
GGPS1O95749 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.15■□□□□ 0.98
GGPS1O95749 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.15■□□□□ 0.98
GGPS1O95749 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
GGPS1O95749 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.15■□□□□ 0.98
GGPS1O95749 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.15■□□□□ 0.98
GGPS1O95749 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.15■□□□□ 0.98
GGPS1O95749 AC093458.2-201ENST00000623150 629 ntBASIC21.15■□□□□ 0.98
GGPS1O95749 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.15■□□□□ 0.98
GGPS1O95749 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.15■□□□□ 0.98
GGPS1O95749 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
GGPS1O95749 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.15■□□□□ 0.98
GGPS1O95749 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
GGPS1O95749 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
GGPS1O95749 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.14■□□□□ 0.98
GGPS1O95749 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
GGPS1O95749 AC034232.1-201ENST00000506026 1064 ntBASIC21.14■□□□□ 0.97
GGPS1O95749 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
GGPS1O95749 AL512353.2-201ENST00000448759 1962 ntBASIC21.14■□□□□ 0.97
GGPS1O95749 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GGPS1O95749 RCC2P3-201ENST00000418112 1537 ntBASIC21.14■□□□□ 0.97
GGPS1O95749 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.14■□□□□ 0.97
GGPS1O95749 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
GGPS1O95749 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.14■□□□□ 0.97
GGPS1O95749 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GGPS1O95749 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms