Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.67
CLDN11O75508 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN11O75508 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN11O75508 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN11O75508 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN11O75508 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.26■□□□□ 0.67
CLDN11O75508 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN11O75508 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.26■□□□□ 0.67
CLDN11O75508 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN11O75508 AC104076.2-201ENST00000448912 469 ntBASIC19.26■□□□□ 0.67
CLDN11O75508 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN11O75508 AC006011.2-201ENST00000621313 1158 ntBASIC19.26■□□□□ 0.67
CLDN11O75508 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN11O75508 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDN11O75508 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN11O75508 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN11O75508 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CLDN11O75508 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN11O75508 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN11O75508 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CLDN11O75508 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 AC008556.1-201ENST00000610908 2040 ntBASIC19.25■□□□□ 0.67
CLDN11O75508 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN11O75508 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN11O75508 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN11O75508 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN11O75508 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CLDN11O75508 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
CLDN11O75508 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.25■□□□□ 0.67
CLDN11O75508 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CLDN11O75508 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CLDN11O75508 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN11O75508 AC139887.4-201ENST00000607877 719 ntBASIC19.25■□□□□ 0.67
CLDN11O75508 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN11O75508 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN11O75508 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CLDN11O75508 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLDN11O75508 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN11O75508 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN11O75508 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN11O75508 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLDN11O75508 AK4P3-201ENST00000418260 669 ntBASIC19.24■□□□□ 0.67
CLDN11O75508 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 AC117947.1-201ENST00000427448 529 ntBASIC19.24■□□□□ 0.67
CLDN11O75508 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN11O75508 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLDN11O75508 AC140113.3-201ENST00000605663 199 ntBASIC19.24■□□□□ 0.67
CLDN11O75508 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 AC083906.6-201ENST00000641366 219 ntBASIC19.24■□□□□ 0.67
CLDN11O75508 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN11O75508 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN11O75508 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CLDN11O75508 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN11O75508 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN11O75508 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms