Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HCN1O60741 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.63■□□□□ 0.41
HCN1O60741 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.63■□□□□ 0.41
HCN1O60741 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HCN1O60741 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HCN1O60741 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HCN1O60741 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HCN1O60741 AC079598.2-202ENST00000546624 1451 ntBASIC17.63■□□□□ 0.41
HCN1O60741 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCN1O60741 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
HCN1O60741 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HCN1O60741 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HCN1O60741 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HCN1O60741 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.62■□□□□ 0.41
HCN1O60741 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HCN1O60741 FAM210CP-201ENST00000445714 574 ntBASIC17.62■□□□□ 0.41
HCN1O60741 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.62■□□□□ 0.41
HCN1O60741 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.62■□□□□ 0.41
HCN1O60741 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.62■□□□□ 0.41
HCN1O60741 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCN1O60741 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HCN1O60741 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HCN1O60741 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
HCN1O60741 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HCN1O60741 HTR7P1-202ENST00000624664 4411 ntBASIC17.61■□□□□ 0.41
HCN1O60741 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.61■□□□□ 0.41
HCN1O60741 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 AC004980.1-204ENST00000429707 299 ntBASIC17.61■□□□□ 0.41
HCN1O60741 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HCN1O60741 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 FITM1-202ENST00000559294 800 ntBASIC17.61■□□□□ 0.41
HCN1O60741 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.61■□□□□ 0.41
HCN1O60741 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.61■□□□□ 0.41
HCN1O60741 AP000525.1-201ENST00000608286 694 ntBASIC17.61■□□□□ 0.41
HCN1O60741 DGCR10-201ENST00000609839 495 ntBASIC17.61■□□□□ 0.41
HCN1O60741 MIR6786-201ENST00000616843 113 ntBASIC17.61■□□□□ 0.41
HCN1O60741 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 KRT8P8-201ENST00000434750 1448 ntBASIC17.61■□□□□ 0.41
HCN1O60741 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.61■□□□□ 0.41
HCN1O60741 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCN1O60741 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.6■□□□□ 0.41
HCN1O60741 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
HCN1O60741 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.6■□□□□ 0.41
HCN1O60741 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.6■□□□□ 0.41
HCN1O60741 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms