Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC3O15379 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC3O15379 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
HDAC3O15379 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
HDAC3O15379 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.37■□□□□ 0.53
HDAC3O15379 AL160286.2-201ENST00000567150 934 ntBASIC18.37■□□□□ 0.53
HDAC3O15379 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.37■□□□□ 0.53
HDAC3O15379 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC3O15379 AC060766.5-201ENST00000590539 871 ntBASIC18.37■□□□□ 0.53
HDAC3O15379 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
HDAC3O15379 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.37■□□□□ 0.53
HDAC3O15379 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.37■□□□□ 0.53
HDAC3O15379 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC3O15379 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC3O15379 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC3O15379 AC020916.1-201ENST00000587762 1774 ntBASIC18.37■□□□□ 0.53
HDAC3O15379 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HDAC3O15379 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
HDAC3O15379 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HDAC3O15379 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC3O15379 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC3O15379 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.37■□□□□ 0.53
HDAC3O15379 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.37■□□□□ 0.53
HDAC3O15379 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HDAC3O15379 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
HDAC3O15379 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.36■□□□□ 0.53
HDAC3O15379 CROCCP5-201ENST00000436658 830 ntBASIC18.36■□□□□ 0.53
HDAC3O15379 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.36■□□□□ 0.53
HDAC3O15379 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.36■□□□□ 0.53
HDAC3O15379 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC3O15379 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.36■□□□□ 0.53
HDAC3O15379 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.36■□□□□ 0.53
HDAC3O15379 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC3O15379 AC083906.2-201ENST00000511578 360 ntBASIC18.36■□□□□ 0.53
HDAC3O15379 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
HDAC3O15379 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.36■□□□□ 0.53
HDAC3O15379 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.36■□□□□ 0.53
HDAC3O15379 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.36■□□□□ 0.53
HDAC3O15379 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.36■□□□□ 0.53
HDAC3O15379 AL121832.2-201ENST00000610979 668 ntBASIC18.36■□□□□ 0.53
HDAC3O15379 AC092437.1-201ENST00000624794 1048 ntBASIC18.36■□□□□ 0.53
HDAC3O15379 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HDAC3O15379 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC3O15379 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC3O15379 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 AC097658.1-201ENST00000475555 843 ntBASIC18.35■□□□□ 0.53
HDAC3O15379 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.35■□□□□ 0.53
HDAC3O15379 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.35■□□□□ 0.53
HDAC3O15379 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.35■□□□□ 0.53
HDAC3O15379 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 AC008764.6-201ENST00000595909 2069 ntBASIC18.35■□□□□ 0.53
HDAC3O15379 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.35■□□□□ 0.53
HDAC3O15379 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HDAC3O15379 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC3O15379 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC3O15379 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC3O15379 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.34■□□□□ 0.53
HDAC3O15379 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HDAC3O15379 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms