Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.12■□□□□ 0.33
SMAD9O15198 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 UNC93B2-201ENST00000285383 730 ntBASIC17.12■□□□□ 0.33
SMAD9O15198 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SMAD9O15198 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SMAD9O15198 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMAD9O15198 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.12■□□□□ 0.33
SMAD9O15198 AP000692.2-201ENST00000608391 879 ntBASIC17.12■□□□□ 0.33
SMAD9O15198 TNXA-203ENST00000507684 2038 ntBASIC17.12■□□□□ 0.33
SMAD9O15198 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 TEX21P-204ENST00000641479 1693 ntBASIC17.12■□□□□ 0.33
SMAD9O15198 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.12■□□□□ 0.33
SMAD9O15198 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMAD9O15198 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SMAD9O15198 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SMAD9O15198 AC079598.2-202ENST00000546624 1451 ntBASIC17.12■□□□□ 0.33
SMAD9O15198 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.11■□□□□ 0.33
SMAD9O15198 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 TSPY23P-201ENST00000440136 739 ntBASIC17.11■□□□□ 0.33
SMAD9O15198 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 AP000525.1-201ENST00000608286 694 ntBASIC17.11■□□□□ 0.33
SMAD9O15198 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 KRT8P11-201ENST00000409686 1436 ntBASIC17.11■□□□□ 0.33
SMAD9O15198 AC005332.7-201ENST00000614046 2005 ntBASIC17.11■□□□□ 0.33
SMAD9O15198 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMAD9O15198 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMAD9O15198 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMAD9O15198 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SMAD9O15198 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMAD9O15198 TSPY21P-201ENST00000433481 731 ntBASIC17.1■□□□□ 0.33
SMAD9O15198 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.1■□□□□ 0.33
SMAD9O15198 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD9O15198 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMAD9O15198 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD9O15198 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.1■□□□□ 0.33
SMAD9O15198 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.1■□□□□ 0.33
SMAD9O15198 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMAD9O15198 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMAD9O15198 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMAD9O15198 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
SMAD9O15198 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms