Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.96■□□□□ 0.31
CCRL2O00421 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.96■□□□□ 0.31
CCRL2O00421 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.96■□□□□ 0.31
CCRL2O00421 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 AC007322.4-201ENST00000509611 723 ntBASIC16.96■□□□□ 0.31
CCRL2O00421 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.96■□□□□ 0.31
CCRL2O00421 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 AC010536.3-201ENST00000620306 533 ntBASIC16.96■□□□□ 0.31
CCRL2O00421 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.96■□□□□ 0.31
CCRL2O00421 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCRL2O00421 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCRL2O00421 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
CCRL2O00421 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCRL2O00421 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.96■□□□□ 0.3
CCRL2O00421 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCRL2O00421 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCRL2O00421 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.96■□□□□ 0.3
CCRL2O00421 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.96■□□□□ 0.3
CCRL2O00421 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCRL2O00421 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.95■□□□□ 0.3
CCRL2O00421 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCRL2O00421 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.95■□□□□ 0.3
CCRL2O00421 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCRL2O00421 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCRL2O00421 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCRL2O00421 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.94■□□□□ 0.3
CCRL2O00421 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCRL2O00421 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
CCRL2O00421 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCRL2O00421 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.94■□□□□ 0.3
CCRL2O00421 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.94■□□□□ 0.3
CCRL2O00421 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.94■□□□□ 0.3
CCRL2O00421 RARRES2P4-201ENST00000514074 484 ntBASIC16.94■□□□□ 0.3
CCRL2O00421 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCRL2O00421 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCRL2O00421 AC134043.2-201ENST00000624206 2238 ntBASIC16.94■□□□□ 0.3
CCRL2O00421 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CCRL2O00421 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.94■□□□□ 0.3
CCRL2O00421 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCRL2O00421 SIRPAP1-201ENST00000448467 1770 ntBASIC16.94■□□□□ 0.3
CCRL2O00421 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CCRL2O00421 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCRL2O00421 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.93■□□□□ 0.3
CCRL2O00421 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms