Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UPK1AO00322 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UPK1AO00322 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 AC020916.1-201ENST00000587762 1774 ntBASIC17.9■□□□□ 0.46
UPK1AO00322 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 RPS2P4-201ENST00000476944 856 ntBASIC17.9■□□□□ 0.46
UPK1AO00322 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 Z85996.1-201ENST00000494644 937 ntBASIC17.9■□□□□ 0.46
UPK1AO00322 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 AC142381.4-202ENST00000563973 229 ntBASIC17.9■□□□□ 0.46
UPK1AO00322 RARRES2P10-201ENST00000564312 460 ntBASIC17.9■□□□□ 0.46
UPK1AO00322 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UPK1AO00322 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UPK1AO00322 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UPK1AO00322 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UPK1AO00322 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPK1AO00322 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UPK1AO00322 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.89■□□□□ 0.46
UPK1AO00322 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UPK1AO00322 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.89■□□□□ 0.46
UPK1AO00322 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK1AO00322 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK1AO00322 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK1AO00322 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UPK1AO00322 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK1AO00322 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AL353807.1-201ENST00000427475 662 ntBASIC17.89■□□□□ 0.45
UPK1AO00322 AC004980.1-204ENST00000429707 299 ntBASIC17.89■□□□□ 0.45
UPK1AO00322 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.89■□□□□ 0.45
UPK1AO00322 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.89■□□□□ 0.45
UPK1AO00322 AF186192.3-201ENST00000583427 947 ntBASIC17.89■□□□□ 0.45
UPK1AO00322 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.89■□□□□ 0.45
UPK1AO00322 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UPK1AO00322 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UPK1AO00322 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UPK1AO00322 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.88■□□□□ 0.45
UPK1AO00322 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UPK1AO00322 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.88■□□□□ 0.45
UPK1AO00322 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 GCSHP5-201ENST00000443090 522 ntBASIC17.88■□□□□ 0.45
UPK1AO00322 KSR1P1-201ENST00000446298 240 ntBASIC17.88■□□□□ 0.45
UPK1AO00322 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
UPK1AO00322 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.88■□□□□ 0.45
UPK1AO00322 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.88■□□□□ 0.45
UPK1AO00322 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.88■□□□□ 0.45
UPK1AO00322 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 AC131212.4-201ENST00000623606 975 ntBASIC17.88■□□□□ 0.45
UPK1AO00322 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 FEM1AP3-201ENST00000403722 1741 ntBASIC17.88■□□□□ 0.45
UPK1AO00322 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms