Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC1O00299 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLIC1O00299 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 AC126763.1-201ENST00000552015 2118 ntBASIC17.8■□□□□ 0.44
CLIC1O00299 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 AC073592.3-201ENST00000625118 1834 ntBASIC17.8■□□□□ 0.44
CLIC1O00299 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.8■□□□□ 0.44
CLIC1O00299 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLIC1O00299 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.8■□□□□ 0.44
CLIC1O00299 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLIC1O00299 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.8■□□□□ 0.44
CLIC1O00299 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLIC1O00299 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLIC1O00299 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLIC1O00299 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLIC1O00299 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
CLIC1O00299 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CLIC1O00299 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 LETM1P2-201ENST00000597330 2178 ntBASIC17.79■□□□□ 0.44
CLIC1O00299 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC1O00299 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC1O00299 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC1O00299 MTDHP1-201ENST00000605323 784 ntBASIC17.79■□□□□ 0.44
CLIC1O00299 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC1O00299 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC1O00299 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 HEIH-201ENST00000623091 1652 ntBASIC17.79■□□□□ 0.44
CLIC1O00299 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLIC1O00299 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.79■□□□□ 0.44
CLIC1O00299 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC1O00299 NOC2LP1-202ENST00000452600 2235 ntBASIC17.79■□□□□ 0.44
CLIC1O00299 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLIC1O00299 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLIC1O00299 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLIC1O00299 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.78■□□□□ 0.44
CLIC1O00299 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLIC1O00299 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIC1O00299 KRT17P3-201ENST00000420566 1262 ntBASIC17.78■□□□□ 0.44
CLIC1O00299 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC1O00299 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIC1O00299 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CLIC1O00299 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CLIC1O00299 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC1O00299 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLIC1O00299 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC1O00299 RCC2P6-201ENST00000526625 1557 ntBASIC17.78■□□□□ 0.44
CLIC1O00299 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIC1O00299 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC1O00299 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLIC1O00299 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC1O00299 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC1O00299 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC1O00299 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms