Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 AL445675.2-201ENST00000620291 557 ntBASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV5-3A0A0A0MS03 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 AP000997.3-201ENST00000623333 2250 ntBASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 MIR935-201ENST00000401179 91 ntBASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PRSS44-201ENST00000515154 1146 ntBASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 AP003097.1-201ENST00000530657 1135 ntBASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 AL357033.4-201ENST00000617703 1807 ntBASIC17.68■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC135776.1-201ENST00000319817 2481 ntBASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 KRT16P5-201ENST00000455284 522 ntBASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV5-3A0A0A0MS03 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC112777.1-201ENST00000540175 1423 ntBASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC004980.1-204ENST00000429707 299 ntBASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV5-3A0A0A0MS03 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms