Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV20-1A0A075B6N2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 AL451085.2-201ENST00000605085 799 ntBASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 LINC00554-201ENST00000564841 3011 ntBASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV20-1A0A075B6N2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 IRX1P1-201ENST00000438849 1838 ntBASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 AP004607.4-201ENST00000530158 1459 ntBASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 CROCCP2-202ENST00000412962 2773 ntBASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV20-1A0A075B6N2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms