Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 DUX4L26-201ENST00000489078 1255 ntBASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HRH3Q9Y5N1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 AC005332.7-201ENST00000614046 2005 ntBASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HRH3Q9Y5N1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AC006011.2-201ENST00000621313 1158 ntBASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AC018445.3-201ENST00000624177 1945 ntBASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.42■□□□□ 0.38
HRH3Q9Y5N1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.41■□□□□ 0.38
HRH3Q9Y5N1 CKBP1-201ENST00000565489 1086 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms