Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB2Q9Y5E7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 AL031133.1-201ENST00000406807 723 ntBASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 AC009947.2-201ENST00000444014 672 ntBASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 AC008622.2-201ENST00000617006 1229 ntBASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDHB2Q9Y5E7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 HOMER2P1-201ENST00000455653 964 ntBASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB2Q9Y5E7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHB2Q9Y5E7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB2Q9Y5E7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHB2Q9Y5E7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB2Q9Y5E7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 BX323043.1-201ENST00000641006 1765 ntBASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB2Q9Y5E7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 AC018445.3-201ENST00000624177 1945 ntBASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 AP000523.1-201ENST00000398242 1049 ntBASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms