Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTN3Q9P232 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTN3Q9P232 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTN3Q9P232 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CNTN3Q9P232 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTN3Q9P232 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTN3Q9P232 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTN3Q9P232 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTN3Q9P232 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.31■□□□□ 0.84
CNTN3Q9P232 AC092647.4-201ENST00000457211 535 ntBASIC20.31■□□□□ 0.84
CNTN3Q9P232 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 GCSHP2-201ENST00000560971 527 ntBASIC20.31■□□□□ 0.84
CNTN3Q9P232 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNTN3Q9P232 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.31■□□□□ 0.84
CNTN3Q9P232 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
CNTN3Q9P232 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CNTN3Q9P232 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTN3Q9P232 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 AC008556.1-201ENST00000610908 2040 ntBASIC20.29■□□□□ 0.84
CNTN3Q9P232 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTN3Q9P232 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CNTN3Q9P232 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.29■□□□□ 0.84
CNTN3Q9P232 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms