Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 AC034232.1-201ENST00000506026 1064 ntBASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NLGN3Q9NZ94 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.47■□□□□ 0.55
NLGN3Q9NZ94 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NLGN3Q9NZ94 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NLGN3Q9NZ94 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NLGN3Q9NZ94 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms