Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC9.71□□□□□ -0.85
CDC42SE1Q9NRR8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42SE1Q9NRR8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42SE1Q9NRR8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42SE1Q9NRR8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42SE1Q9NRR8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
CDC42SE1Q9NRR8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 AC138969.2-201ENST00000532739 9932 ntBASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 AC004687.1-201ENST00000579003 1625 ntBASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
CDC42SE1Q9NRR8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 CICP14-201ENST00000629111 2732 ntBASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 FAM45BP-202ENST00000592932 1624 ntBASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC9.7□□□□□ -0.86
CDC42SE1Q9NRR8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
CDC42SE1Q9NRR8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms