Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNF1Q9H3M0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 AC022211.2-201ENST00000585075 2527 ntBASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 HEIH-201ENST00000623091 1652 ntBASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 GPX1P1-201ENST00000388829 606 ntBASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KCNF1Q9H3M0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 BID-214ENST00000617586 542 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNF1Q9H3M0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 AC141586.5-201ENST00000624546 2050 ntBASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.58■□□□□ 0.88
KCNF1Q9H3M0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 REXO1L9P-201ENST00000604264 2108 ntBASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNF1Q9H3M0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 CYP2T1P-201ENST00000432607 1285 ntBASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNF1Q9H3M0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms