Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 HLA-A-209ENST00000638375 975 ntBASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 AL512353.2-201ENST00000448759 1962 ntBASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR2J2Q9GZM3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 AC090164.3-201ENST00000610780 2143 ntBASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR2J2Q9GZM3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.38
POLR2J2Q9GZM3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 KRT17P3-201ENST00000420566 1262 ntBASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
POLR2J2Q9GZM3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLR2J2Q9GZM3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J2Q9GZM3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
POLR2J2Q9GZM3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J2Q9GZM3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR2J2Q9GZM3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms