Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC083906.6-201ENST00000641366 219 ntBASIC17.4■□□□□ 0.38
TRIM2Q9C040 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 AL031598.1-201ENST00000561511 1773 ntBASIC17.4■□□□□ 0.38
TRIM2Q9C040 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM2Q9C040 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
TRIM2Q9C040 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 MIR718-201ENST00000390190 70 ntBASIC17.39■□□□□ 0.37
TRIM2Q9C040 NIFKP9-201ENST00000419265 221 ntBASIC17.39■□□□□ 0.37
TRIM2Q9C040 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 AP002982.1-201ENST00000492365 877 ntBASIC17.39■□□□□ 0.37
TRIM2Q9C040 Z85996.1-201ENST00000494644 937 ntBASIC17.39■□□□□ 0.37
TRIM2Q9C040 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM2Q9C040 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM2Q9C040 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 AL353708.3-201ENST00000610272 989 ntBASIC17.38■□□□□ 0.37
TRIM2Q9C040 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM2Q9C040 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM2Q9C040 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 AL353807.1-201ENST00000427475 662 ntBASIC17.37■□□□□ 0.37
TRIM2Q9C040 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM2Q9C040 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRIM2Q9C040 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms