Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE1Q99829 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 AC233263.1-201ENST00000578059 224 ntBASIC18.9■□□□□ 0.62
CPNE1Q99829 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE1Q99829 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE1Q99829 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE1Q99829 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE1Q99829 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.9■□□□□ 0.62
CPNE1Q99829 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE1Q99829 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CPNE1Q99829 RCC2P6-201ENST00000526625 1557 ntBASIC18.89■□□□□ 0.62
CPNE1Q99829 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE1Q99829 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE1Q99829 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE1Q99829 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPNE1Q99829 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPNE1Q99829 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPNE1Q99829 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 AC239809.2-201ENST00000415381 517 ntBASIC18.89■□□□□ 0.61
CPNE1Q99829 HLA-L-209ENST00000420110 1011 ntBASIC18.89■□□□□ 0.61
CPNE1Q99829 POU5F1P3-201ENST00000428824 1078 ntBASIC18.89■□□□□ 0.61
CPNE1Q99829 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE1Q99829 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE1Q99829 AL023875.1-201ENST00000640777 796 ntBASIC18.89■□□□□ 0.61
CPNE1Q99829 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CPNE1Q99829 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPNE1Q99829 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CPNE1Q99829 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE1Q99829 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE1Q99829 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPNE1Q99829 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE1Q99829 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 KRASP1-201ENST00000407852 552 ntBASIC18.88■□□□□ 0.61
CPNE1Q99829 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.88■□□□□ 0.61
CPNE1Q99829 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CPNE1Q99829 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.88■□□□□ 0.61
CPNE1Q99829 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CPNE1Q99829 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.88■□□□□ 0.61
CPNE1Q99829 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE1Q99829 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CPNE1Q99829 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE1Q99829 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE1Q99829 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPNE1Q99829 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CPNE1Q99829 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CPNE1Q99829 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE1Q99829 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE1Q99829 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CPNE1Q99829 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE1Q99829 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.87■□□□□ 0.61
CPNE1Q99829 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE1Q99829 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE1Q99829 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE1Q99829 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms