Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 PCDH8P1-201ENST00000428983 2773 ntBASIC16.3■□□□□ 0.2
SDHCQ99643 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SDHCQ99643 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 RARRES2P1-201ENST00000474487 481 ntBASIC16.3■□□□□ 0.2
SDHCQ99643 AC024257.2-201ENST00000549699 147 ntBASIC16.3■□□□□ 0.2
SDHCQ99643 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.3■□□□□ 0.2
SDHCQ99643 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SDHCQ99643 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SDHCQ99643 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SDHCQ99643 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.3■□□□□ 0.2
SDHCQ99643 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SDHCQ99643 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.29■□□□□ 0.2
SDHCQ99643 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SDHCQ99643 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SDHCQ99643 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.29■□□□□ 0.2
SDHCQ99643 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.29■□□□□ 0.2
SDHCQ99643 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.29■□□□□ 0.2
SDHCQ99643 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.29■□□□□ 0.2
SDHCQ99643 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.29■□□□□ 0.2
SDHCQ99643 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.29■□□□□ 0.2
SDHCQ99643 AC023632.3-201ENST00000521633 145 ntBASIC16.29■□□□□ 0.2
SDHCQ99643 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SDHCQ99643 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SDHCQ99643 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SDHCQ99643 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.28■□□□□ 0.2
SDHCQ99643 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 UNC93B3-201ENST00000308076 687 ntBASIC16.28■□□□□ 0.2
SDHCQ99643 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.28■□□□□ 0.2
SDHCQ99643 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.28■□□□□ 0.2
SDHCQ99643 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.28■□□□□ 0.2
SDHCQ99643 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SDHCQ99643 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
SDHCQ99643 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.28■□□□□ 0.2
SDHCQ99643 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SDHCQ99643 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.28■□□□□ 0.2
SDHCQ99643 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SDHCQ99643 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
SDHCQ99643 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
SDHCQ99643 LINC00602-201ENST00000629776 2065 ntBASIC16.27■□□□□ 0.2
SDHCQ99643 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.27■□□□□ 0.2
SDHCQ99643 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SDHCQ99643 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms