Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDCA5Q96FF9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 AL162377.1-201ENST00000618844 1793 ntBASIC22.1■■□□□ 1.13
CDCA5Q96FF9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 IGHGP-201ENST00000390555 1178 ntBASIC22.1■■□□□ 1.13
CDCA5Q96FF9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 FAM197Y8-203ENST00000450145 560 ntBASIC22.1■■□□□ 1.13
CDCA5Q96FF9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 KRT18P58-201ENST00000527480 1120 ntBASIC22.1■■□□□ 1.13
CDCA5Q96FF9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC22.1■■□□□ 1.13
CDCA5Q96FF9 AC008556.1-201ENST00000610908 2040 ntBASIC22.1■■□□□ 1.13
CDCA5Q96FF9 RCC2P3-201ENST00000418112 1537 ntBASIC22.1■■□□□ 1.13
CDCA5Q96FF9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 MIR1233-2-201ENST00000408138 82 ntBASIC22.09■■□□□ 1.13
CDCA5Q96FF9 MIR1233-1-201ENST00000408722 82 ntBASIC22.09■■□□□ 1.13
CDCA5Q96FF9 AC092183.1-201ENST00000469884 875 ntBASIC22.09■■□□□ 1.13
CDCA5Q96FF9 GUSBP12-201ENST00000513727 720 ntBASIC22.09■■□□□ 1.13
CDCA5Q96FF9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDCA5Q96FF9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 AL031284.1-201ENST00000419297 478 ntBASIC22.08■■□□□ 1.13
CDCA5Q96FF9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.08■■□□□ 1.13
CDCA5Q96FF9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
CDCA5Q96FF9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.08■■□□□ 1.12
CDCA5Q96FF9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
CDCA5Q96FF9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 LINC00565-201ENST00000562710 2331 ntBASIC22.07■■□□□ 1.12
CDCA5Q96FF9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 VENTXP7-201ENST00000475503 772 ntBASIC22.07■■□□□ 1.12
CDCA5Q96FF9 POLD2P1-201ENST00000511220 997 ntBASIC22.07■■□□□ 1.12
CDCA5Q96FF9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 AC148477.8-201ENST00000624298 468 ntBASIC22.07■■□□□ 1.12
CDCA5Q96FF9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDCA5Q96FF9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.06■■□□□ 1.12
CDCA5Q96FF9 KRT18P67-201ENST00000432816 1264 ntBASIC22.06■■□□□ 1.12
CDCA5Q96FF9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms