Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM11Q96F44 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM11Q96F44 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 AC090164.3-201ENST00000610780 2143 ntBASIC19.98■□□□□ 0.79
TRIM11Q96F44 ITM2C-210ENST00000620962 501 ntBASIC19.98■□□□□ 0.79
TRIM11Q96F44 AL135905.2-201ENST00000584934 1404 ntBASIC19.98■□□□□ 0.79
TRIM11Q96F44 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM11Q96F44 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM11Q96F44 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 AC011298.2-201ENST00000617989 482 ntBASIC19.97■□□□□ 0.79
TRIM11Q96F44 AL359736.2-201ENST00000621992 437 ntBASIC19.97■□□□□ 0.79
TRIM11Q96F44 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TRIM11Q96F44 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM11Q96F44 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM11Q96F44 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
TRIM11Q96F44 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM11Q96F44 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM11Q96F44 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM11Q96F44 AC138932.1-201ENST00000534164 6830 ntBASIC19.96■□□□□ 0.79
TRIM11Q96F44 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM11Q96F44 KRT18P29-201ENST00000397031 1267 ntBASIC19.96■□□□□ 0.79
TRIM11Q96F44 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 AC068587.9-201ENST00000641814 219 ntBASIC19.96■□□□□ 0.79
TRIM11Q96F44 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM11Q96F44 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM11Q96F44 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM11Q96F44 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM11Q96F44 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.95■□□□□ 0.79
TRIM11Q96F44 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM11Q96F44 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM11Q96F44 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms