Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 AC091874.3-201ENST00000512672 1195 ntBASIC17.97■□□□□ 0.47
LRRC58Q96CX6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 IKBKGP1-201ENST00000612193 1073 ntBASIC17.97■□□□□ 0.47
LRRC58Q96CX6 AC092118.2-201ENST00000613495 667 ntBASIC17.97■□□□□ 0.47
LRRC58Q96CX6 AL121829.2-201ENST00000620908 328 ntBASIC17.97■□□□□ 0.47
LRRC58Q96CX6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC58Q96CX6 AC020916.1-201ENST00000587762 1774 ntBASIC17.96■□□□□ 0.47
LRRC58Q96CX6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 TSPY23P-201ENST00000440136 739 ntBASIC17.96■□□□□ 0.47
LRRC58Q96CX6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 AC120498.8-201ENST00000614275 531 ntBASIC17.96■□□□□ 0.47
LRRC58Q96CX6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC58Q96CX6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRRC58Q96CX6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 AC008764.6-201ENST00000595909 2069 ntBASIC17.95■□□□□ 0.46
LRRC58Q96CX6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 CDCA4P2-201ENST00000441182 718 ntBASIC17.95■□□□□ 0.46
LRRC58Q96CX6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 AC090192.1-201ENST00000517740 490 ntBASIC17.95■□□□□ 0.46
LRRC58Q96CX6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 HEIH-201ENST00000623091 1652 ntBASIC17.95■□□□□ 0.46
LRRC58Q96CX6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC58Q96CX6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 MIR663A-201ENST00000385250 93 ntBASIC17.94■□□□□ 0.46
LRRC58Q96CX6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC58Q96CX6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms