Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.96■□□□□ 0.31
CPNE4Q96A23 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.96■□□□□ 0.3
CPNE4Q96A23 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.96■□□□□ 0.3
CPNE4Q96A23 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE4Q96A23 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE4Q96A23 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CPNE4Q96A23 KRT8P3-201ENST00000519669 1449 ntBASIC16.96■□□□□ 0.3
CPNE4Q96A23 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 ECEL1P3-201ENST00000427961 737 ntBASIC16.95■□□□□ 0.3
CPNE4Q96A23 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 AC007663.1-201ENST00000438948 1240 ntBASIC16.95■□□□□ 0.3
CPNE4Q96A23 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CPNE4Q96A23 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.95■□□□□ 0.3
CPNE4Q96A23 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.94■□□□□ 0.3
CPNE4Q96A23 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 AC005363.2-201ENST00000618631 242 ntBASIC16.94■□□□□ 0.3
CPNE4Q96A23 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.94■□□□□ 0.3
CPNE4Q96A23 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CPNE4Q96A23 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.93■□□□□ 0.3
CPNE4Q96A23 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPNE4Q96A23 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 HMGA1P5-201ENST00000412453 271 ntBASIC16.93■□□□□ 0.3
CPNE4Q96A23 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CPNE4Q96A23 AL512604.3-201ENST00000569583 964 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms